TraDES-2 Downloads
120612b_TraDES_Source.tar.gz README README.unpack TraDES-2-20120612-BioSlax_x32.tar.gz TraDES-2-20120612-CentOS5_5_x86.tar.gz TraDES-2-20120612-CentOS5_5_x86_64.tar.gz TraDES-2-20120612-CentOS6_x86_64.tar.gz TraDES-2-20120612-Fedora14_x86.tar.gz TraDES-2-20120612-Fedora14_x86_64.tar.gz TraDES-2-20120612-FreeBSD9_x86_64.tar.gz TraDES-2-20120612-MacOSX10_4_PPC.tar.gz TraDES-2-20120612-MacOSX10_6_x86.tar.gz TraDES-2-20120612-OpenSUSE11_3_x86_64.tar.gz TraDES-2-20120612-Ubuntu11_x86.tar.gz TraDES-2-20120612-Ubuntu11_x86_64.tar.gz TraDES-2-20120612-Windows32.zip TraDES-2-20120612-illumOS_x86_64.tar.gz TraDES-WindowsXP-VisTraj.zip copyright The Blueprint Initiative Christopher W. V. Hogue chogue@blueprint.org TraDES-2 Download Hosting https://us-east.manta.joyent.com/profhogue/public/TraDES-2/index.html README LAST UPDATE OF THIS README: Wed Nov 26 2014 --->20120612 is the current TraDES-2 release. --->IMPORTANT NOTE: If you are using TraDES structures, use the command-line argument -k T This disables a PCA rotation bug that may flip the Z axis of some 3D structures. To see what is new - read the whatsnew.txt file It is in the ./TraDES-2/ directory in the executable distribution. The source code archive has the file buried here: /nusi/TraDES/common/Documentation/whatsnew.txt ------------------------------------------ This area contains information of interest organized into the following directories according to projects. Files/Directories are released as indicated on their data/timestamp. This area contains data files and programs related to the TraDES structural biology project conducted in the research laboratory of CWV. Hogue. Please read the README files in each directory for more details, including licence and data policies. ---------------------------------------------------------------- TraDES is a package that makes large numbers of protein 3D structures by sampling protein conformational space, and contains tools for visualization, ensemble filtering, protein unfolding and analysis tools. FILES------------------------------------------------------------ DISTIBUTION Executables TraDES-2-YYYYMMDD_OS.[tar.gz|zip] Points to the most recent release of the foldtraj software for a given OS; SOURCE CODE YYMMDDx_TraDES_Source.tar.gz Trades Source code for Win/Mac/Unix BSD licence, plus 3rd-party licenses Instructions and compile scripts included. ----------------------------------------------------------------- To extract on unix: gzip -d [package name]-[release date]-[OS].tar.gz tar -xvf [package name]-[release date]-[OS].tar where [OS] is one of linux-i386, solaris, irix6x, etc. on Windows: pkunzip -d [package name]-[release date]-Windows32.zip or use 7zip, Compressed Folders or a similar program. Use 7zip on Windows to uncompress the Source Code. ------------------------------------ Inquires: chogue@blueprint.org ------------------------------------